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WormBase Tree Display for CDS: SRAE_X000130900

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Name Class

SRAE_X000130900SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1255
303587
DB_infoDatabaseUniProtUniProtAccA0A090KWB7
UniProtIdA0A090KWB7_STRRB
DB_remarkcontains similarity to Pfam domain PF02221 (ML domain); contains similarity to Interpro domain IPR003172 (MD-2-related lipid-recognition domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00266876
Corresponding_transcriptSRAE_X000130900.1
Corresponding_proteinSRP08052
Matching_cDNABI742070Inferred_automaticallytranscript_builder.pl
FC809944Inferred_automaticallytranscript_builder.pl
FC815306Inferred_automaticallytranscript_builder.pl
BG893953Inferred_automaticallytranscript_builder.pl
Brief_identificationMD-2-related lipid-recognition domain-containing protein
RNASeq_FPKMWBls:0000677365.004From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
381.642From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
611.327From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
615.825From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
645.521From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
657.839From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:0000678102.681From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
216.485From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
221.453From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
257.748From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
356.508From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
357.738From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
93.0764From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
97.5835From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
WBls:00006803.67038From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823239.01From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated