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WormBase Tree Display for CDS: SRAE_X000129500

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Name Class

SRAE_X000129500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1169
2331323
DB_infoDatabaseUniProtUniProtAccA0A090KPQ0
UniProtIdA0A090KPQ0_STRRB
DB_remarkcontains similarity to Pfam domain PF02847 (MA3 domain); contains similarity to Interpro domains IPR016021 (), IPR003891 (Initiation factor eIF-4 gamma, MA3), IPR039778 (Programmed cell death protein 4), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266862
Corresponding_transcriptSRAE_X000129500.1
Corresponding_proteinSRP09632
Brief_identificationInitiation factor eIF-4 gamma, MA3 domain and MIF4-like, type 1/2/3 domain and Armadillo-type fold domain-containing protein
RNASeq_FPKMWBls:0000677100.164From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
105.76From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
109.528From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
111.387From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
113.379From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
98.8994From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067827.0462From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
27.7671From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
79.9532From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
80.1489From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
81.0086From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
81.9444From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
82.774From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
83.8554From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:0000680209.404From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068238.5929From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated