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WormBase Tree Display for CDS: SRAE_X000127600

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Name Class

SRAE_X000127600SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1201
284908
9981122
11611592
DB_infoDatabaseUniProtUniProtAccA0A090KQ69
UniProtIdA0A090KQ69_STRRB
DB_remarkcontains similarity to Interpro domains IPR001680 (WD40 repeat), IPR000009 (Protein phosphatase 2A regulatory subunit PR55), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00266843
Corresponding_transcriptSRAE_X000127600.1
Corresponding_proteinSRP12144
Matching_cDNAFC813914Inferred_automaticallytranscript_builder.pl
FC821344Inferred_automaticallytranscript_builder.pl
FC821959Inferred_automaticallytranscript_builder.pl
Brief_identificationSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta
RNASeq_FPKMWBls:0000677109.602From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
110.841From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
119.132From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
121.495From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
122.446From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
123.742From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:0000678104.53From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
145.681From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
148.805From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
156.892From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
157.096From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
164.905From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
167.395From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
88.5109From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:0000680131.122From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823.01842From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated