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WormBase Tree Display for CDS: SRAE_X000126900

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Name Class

SRAE_X000126900SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons118
14791834
19652320
24554491
52437122
DB_infoDatabaseUniProtUniProtAccA0A090KW73
UniProtIdA0A090KW73_STRRB
DB_remarkcontains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF00102 (Protein-tyrosine phosphatase); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR003961 (Fibronectin type III), IPR029021 (Protein-tyrosine phosphatase-like), IPR013783 (Immunoglobulin-like fold), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain), IPR036116 (Fibronectin type III superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266836
Corresponding_transcriptSRAE_X000126900.1
Corresponding_proteinSRP03655
Brief_identificationPhosphatidylinositol phosphatase PTPRQ
RNASeq_FPKMWBls:000067720.9512From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
21.2477From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
21.6517From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
22.6048From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
22.6719From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
23.5836From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:000067827.1601From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
29.1522From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
41.7346From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
42.08From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
42.253From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
42.6391From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
46.3658From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
46.6542From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006805.49105From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.008345From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated