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WormBase Tree Display for CDS: SRAE_X000124700

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Name Class

SRAE_X000124700SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1160
10351232
12812181
22292418
DB_infoDatabaseUniProtUniProtAccA0A090KQ41
UniProtIdA0A090KQ41_STRRB
DB_remarkcontains similarity to Pfam domains PF01565 (FAD binding domain), PF02913 (FAD linked oxidases, C-terminal domain); contains similarity to Interpro domains IPR016167 (FAD-binding, type PCMH, subdomain 1), IPR016171 (Vanillyl-alcohol oxidase, C-terminal subdomain 2), IPR036318 (FAD-binding, type PCMH-like superfamily), IPR016164 (FAD-linked oxidase-like, C-terminal), IPR006094 (FAD linked oxidase, N-terminal), IPR004113 (FAD-binding oxidoreductase/transferase, type 4, C-terminal), IPR016169 (FAD-binding, type PCMH, subdomain 2)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266813
Corresponding_transcriptSRAE_X000124700.1
Corresponding_proteinSRP05100
Brief_identificationD-2-hydroxyglutarate dehydrogenase,mitochondrial
RNASeq_FPKMWBls:000067710.1102From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
10.5638From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
12.5129From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
13.4461From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
13.9274From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
15.2714From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:000067812.5793From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
12.9499From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
13.0068From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
13.0566From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
13.0831From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
13.9877From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
4.67941From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
6.43202From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068014.0036From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823.78424From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated