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WormBase Tree Display for CDS: SRAE_X000124600

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Name Class

SRAE_X000124600SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1193
246735
7901960
DB_infoDatabaseUniProtUniProtAccA0A090KPJ1
UniProtIdA0A090KPJ1_STRRB
DB_remarkcontains similarity to Pfam domains PF00535 (Glycosyl transferase family 2), PF00652 (Ricin-type beta-trefoil lectin domain); contains similarity to Interpro domains IPR035992 (Ricin B-like lectins), IPR000772 (Ricin B, lectin domain), IPR001173 (Glycosyltransferase 2-like), IPR029044 (Nucleotide-diphospho-sugar transferases)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266812
Corresponding_transcriptSRAE_X000124600.1
Corresponding_proteinSRP05349
Brief_identificationRicin B lectin domain and Glycosyltransferase 2-like domain-containing protein
RNASeq_FPKMWBls:000067714.9615From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
15.2719From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
15.3212From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
15.5424From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
15.9679From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
17.362From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067815.5912From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
16.0307From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
16.4167From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
16.9811From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
18.4616From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
19.617From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
7.32035From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
8.85745From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:000068028.586From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.00844From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated