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WormBase Tree Display for CDS: SRAE_X000122000

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Name Class

SRAE_X000122000SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons121
68337
3851260
DB_infoDatabaseUniProtUniProtAccA0A090KW21
UniProtIdA0A090KW21_STRRB
DB_remarkcontains similarity to Pfam domains PF08443 (RimK-like ATP-grasp domain), PF18086 (Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain); contains similarity to Interpro domains IPR040557 (VIP1, N-terminal), IPR013651 (ATP-grasp fold, RimK-type), IPR037446 (Histidine acid phosphatase, VIP1 family)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266786
Corresponding_transcriptSRAE_X000122000.1
Corresponding_proteinSRP06266
Brief_identificationATP-grasp fold domain and ATP-grasp fold,RimK-type domain-containing protein
RNASeq_FPKMWBls:000067755.135From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
55.4471From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
55.742From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
56.8882From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
68.8877From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
70.3692From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067813.3856From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
26.3791From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
36.2677From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
37.6456From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
38.1342From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
39.1757From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
43.0066From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
47.8449From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:00006801.8476From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006825.91916From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated