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WormBase Tree Display for CDS: SRAE_X000121400

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Name Class

SRAE_X000121400SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons169
109819
DB_infoDatabaseUniProtUniProtAccA0A090MN38
UniProtIdA0A090MN38_STRRB
DB_remarkcontains similarity to Pfam domain PF01764 (Lipase (class 3)); contains similarity to Interpro domains IPR002921 (Fungal lipase-like domain), IPR029058 (Alpha/Beta hydrolase fold)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00266780
Corresponding_transcriptSRAE_X000121400.1
Corresponding_proteinSRP08194
Matching_cDNABI074164Inferred_automaticallytranscript_builder.pl
FC815847Inferred_automaticallytranscript_builder.pl
FC815908Inferred_automaticallytranscript_builder.pl
FC816764Inferred_automaticallytranscript_builder.pl
BI502427Inferred_automaticallytranscript_builder.pl
BI502422Inferred_automaticallytranscript_builder.pl
BI074138Inferred_automaticallytranscript_builder.pl
FC816676Inferred_automaticallytranscript_builder.pl
FC811188Inferred_automaticallytranscript_builder.pl
FC811262Inferred_automaticallytranscript_builder.pl
Brief_identificationLipase, class 3 family-containing protein
RNASeq_FPKMWBls:0000677112.606From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
115.597From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
209.894From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
216.34From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
216.572From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
218.64From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:000067815.7271From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
25.1484From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
30.853From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
33.1452From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
41.0085From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
41.1461From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
59.439From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
64.307From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:000068013.5939From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682571.338From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated