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WormBase Tree Display for CDS: SRAE_X000117000

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Name Class

SRAE_X000117000SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons11263
13221659
17161926
DB_infoDatabaseUniProtUniProtAccA0A090KVX9
UniProtIdA0A090KVX9_STRRB
DB_remarkcontains similarity to Pfam domain PF07690 (Major Facilitator Superfamily); contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR036259 (MFS transporter superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266736
Corresponding_transcriptSRAE_X000117000.1
Corresponding_proteinSRP06300
Brief_identificationMajor facilitator superfamily and Major facilitator superfamily domain, general substrate transporter-containing protein
RNASeq_FPKMWBls:000067725.1526From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
25.386From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
25.8395From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
26.8785From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
27.0796From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
29.0014From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:000067810.5889From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
27.8526From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
27.9913From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
28.0268From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
30.2142From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
30.5871From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
30.6149From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
6.87333From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:00006806.26337From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823.30286From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated