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WormBase Tree Display for CDS: SRAE_X000114000

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Name Class

SRAE_X000114000SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons116
53172
225728
765955
10041518
15882353
DB_infoDatabaseUniProtUniProtAccA0A090KVV7
UniProtIdA0A090KVV7_STRRB
DB_remarkcontains similarity to Pfam domains PF01412 (Putative GTPase activating protein for Arf), PF13637 (Ankyrin repeats (many copies)); contains similarity to Interpro domains IPR013724 (GIT, Spa2 homology (SHD) domain), IPR002110 (Ankyrin repeat), IPR037278 (ARFGAP/RecO-like zinc finger), IPR001164 (Arf GTPase activating protein), IPR038508 (ArfGAP domain superfamily), IPR036770 (Ankyrin repeat-containing domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00266706
Corresponding_transcriptSRAE_X000114000.1
Corresponding_proteinSRP07982
Matching_cDNABI397266Inferred_automaticallytranscript_builder.pl
BI397267Inferred_automaticallytranscript_builder.pl
Brief_identificationGit
RNASeq_FPKMWBls:000067723.6095From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
24.2743From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
24.964From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
25.3087From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
25.359From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
25.6589From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:000067811.5473From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
17.9993From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
18.4301From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
18.7186From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
19.2581From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
19.6974From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
20.0481From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
7.45031From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:00006803.18957From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.53373From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated