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WormBase Tree Display for CDS: SRAE_X000112300

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Name Class

SRAE_X000112300SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons166
122333
378453
5021035
10901222
12774521
DB_infoDatabaseUniProtUniProtAccA0A090KPR3
UniProtIdA0A090KPR3_STRRB
DB_remarkcontains similarity to Pfam domains PF00595 (PDZ domain), PF00617 (RasGEF domain), PF00788 (Ras association (RalGDS/AF-6) domain); contains similarity to Interpro domains IPR018490 (Cyclic nucleotide-binding domain superfamily), IPR001895 (Ras guanine-nucleotide exchange factors catalytic domain), IPR000159 (Ras-associating domain), IPR000595 (Cyclic nucleotide-binding domain), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR000651 (Ras-like guanine nucleotide exchange factor, N-terminal), IPR008937 (Ras-like guanine nucleotide exchange factor), IPR023578 (Ras guanine nucleotide exchange factor domain superfamily), IPR014710 (RmlC-like jelly roll fold)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266688
Corresponding_transcriptSRAE_X000112300.1
Corresponding_proteinSRP09798
Brief_identificationDizzy
RNASeq_FPKMWBls:000067725.8692From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
26.0038From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
26.9994From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
27.6477From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
28.1514From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
28.2531From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:000067811.2009From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
14.9462From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
17.8514From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
18.3889From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
20.7489From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
21.0161From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
21.5493From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
21.886From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006805.39273From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated