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WormBase Tree Display for CDS: SRAE_X000112100

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Name Class

SRAE_X000112100SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1343
399871
9171936
19822053
21072383
24232581
26223442
34933573
36253678
DB_infoDatabaseUniProtUniProtAccA0A090KVU1
UniProtIdA0A090KVU1_STRRB
DB_remarkcontains similarity to Pfam domains PF00211 (Adenylate and Guanylate cyclase catalytic domain), PF01094 (Receptor family ligand binding region), PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR029787 (Nucleotide cyclase), IPR001828 (Receptor, ligand binding region), IPR028082 (Periplasmic binding protein-like I), IPR000719 (Protein kinase domain), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266686
Corresponding_transcriptSRAE_X000112100.1
Corresponding_proteinSRP04108
Brief_identificationGuanylate cyclase
RNASeq_FPKMWBls:00006770.86667From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
0.918571From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
1.15656From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
1.20021From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
1.23392From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
1.60412From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006780.470721From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
0.528161From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
0.78276From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
0.929344From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
0.932723From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
0.994686From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
1.18086From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
1.19662From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006802.92499From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated