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WormBase Tree Display for CDS: SRAE_X000111800

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Name Class

SRAE_X000111800SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons11010
10591385
14381490
15392217
22713003
DB_infoDatabaseUniProtUniProtAccA0A090KPQ8
UniProtIdA0A090KPQ8_STRRB
DB_remarkcontains similarity to Pfam domains PF00617 (RasGEF domain), PF00618 (RasGEF N-terminal motif); contains similarity to Interpro domains IPR001895 (Ras guanine-nucleotide exchange factors catalytic domain), IPR000651 (Ras-like guanine nucleotide exchange factor, N-terminal), IPR008937 (Ras-like guanine nucleotide exchange factor), IPR023578 (Ras guanine nucleotide exchange factor domain superfamily), IPR036964 (Ras guanine-nucleotide exchange factor, catalytic domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266683
Corresponding_transcriptSRAE_X000111800.1
Corresponding_proteinSRP03211
Brief_identificationRap guanine nucleotide exchange factor 1
RNASeq_FPKMWBls:000067710.3964From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
10.7758From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
11.3605From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
12.2008From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
9.88672From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
9.9749From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:000067811.654From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
11.7786From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
3.08767From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
3.48512From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
5.70862From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
6.38963From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
8.92567From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
9.28957From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:00006800.809428From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.174313From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated