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WormBase Tree Display for CDS: SRAE_X000110100

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Name Class

SRAE_X000110100SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons154
6101158
12711921
DB_infoDatabaseUniProtUniProtAccA0A090KVS6
UniProtIdA0A090KVS6_STRRB
DB_remarkcontains similarity to Pfam domains PF00339 (Arrestin (or S-antigen), N-terminal domain), PF02752 (Arrestin (or S-antigen), C-terminal domain); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR011022 (Arrestin C-terminal-like domain), IPR014752 (Arrestin-like, C-terminal), IPR011021 (Arrestin-like, N-terminal)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266666
Corresponding_transcriptSRAE_X000110100.1
Corresponding_proteinSRP03296
Brief_identificationArrestin-like, N-terminal domain and Arrestin C-terminal-like domain and Arrestin, C-terminal domain and Immunoglobulin E-set domain-containing protein
RNASeq_FPKMWBls:00006772.75144From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
2.79569From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
3.36461From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
3.61373From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
3.8105From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
3.97222From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006780.425343From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
0.758571From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
1.25233From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
1.39968From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
1.52032From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
1.62067From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
2.08911From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
2.22774From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:000068012.6486From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.53512From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated