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WormBase Tree Display for CDS: SRAE_X000106700

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Name Class

SRAE_X000106700SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1703
7749786
98349918
DB_infoDatabaseUniProtUniProtAccA0A090MMR8
UniProtIdA0A090MMR8_STRRB
DB_remarkcontains similarity to Pfam domains PF02138 (Beige/BEACH domain), PF14844 (PH domain associated with Beige/BEACH); contains similarity to Interpro domains IPR000409 (BEACH domain), IPR023362 (PH-BEACH domain), IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR036372 (BEACH domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266630
Corresponding_transcriptSRAE_X000106700.1
Corresponding_proteinSRP06016
Brief_identificationBlue cheese
RNASeq_FPKMWBls:00006774.78391From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
4.8954From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
4.96474From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
5.06715From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
6.24767From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
6.34557From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:00006781.93967From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
3.10145From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
3.58806From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
3.6287From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
4.21687From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
4.3405From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
4.42513From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
4.54412From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006808.24737From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.011438From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated