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WormBase Tree Display for CDS: SRAE_X000106400

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Name Class

SRAE_X000106400SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1432
521958
10062082
DB_infoDatabaseUniProtUniProtAccA0A090KNZ4
UniProtIdA0A090KNZ4_STRRB
DB_remarkcontains similarity to Pfam domains PF00485 (Phosphoribulokinase / Uridine kinase family), PF14681 (Uracil phosphoribosyltransferase); contains similarity to Interpro domains IPR029933 (), IPR000764 (Uridine kinase-like), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR029057 (Phosphoribosyltransferase-like), IPR006083 (Phosphoribulokinase/uridine kinase)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266627
Corresponding_transcriptSRAE_X000106400.1
Corresponding_proteinSRP06906
Brief_identificationUridine kinase
RNASeq_FPKMWBls:000067711.0454From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
12.1694From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
13.4049From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
14.9796From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
8.94834From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
9.41723From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:000067810.9338From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
11.0165From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
12.1568From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
12.1619From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
14.0125From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
14.0593From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
7.12685From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
7.42008From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:000068011.2032From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.774158From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated