Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: SRAE_X000106200

expand all nodes | collapse all nodes | view schema

Name Class

SRAE_X000106200SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1316
379696
7421646
17081806
18652068
DB_infoDatabaseUniProtUniProtAccA0A090MMR5
UniProtIdA0A090MMR5_STRRB
DB_remarkcontains similarity to Pfam domains PF00069 (Protein kinase domain), PF00130 (Phorbol esters/diacylglycerol binding domain (C1 domain)), PF00433 (Protein kinase C terminal domain), PF00564 (PB1 domain); contains similarity to Interpro domains IPR012233 (Protein kinase C), IPR020454 (Diacylglycerol/phorbol-ester binding), IPR011009 (Protein kinase-like domain superfamily), IPR017892 (Protein kinase, C-terminal), IPR000719 (Protein kinase domain), IPR000270 (PB1 domain), IPR000961 (AGC-kinase, C-terminal), IPR002219 (Protein kinase C-like, phorbol ester/diacylglycerol-binding domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266625
Corresponding_transcriptSRAE_X000106200.1
Corresponding_proteinSRP04478
Brief_identificationProtein kinase C zeta type
RNASeq_FPKMWBls:000067744.5063From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
44.7923From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
45.0543From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
46.214From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
47.7349From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
49.7284From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:000067848.2867From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
71.6933From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
75.0571From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
76.1906From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
76.9907From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
77.75From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
79.0598From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
79.4193From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:000068011.7751From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated