WormBase Tree Display for CDS: R03E9.1
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R03E9.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R03E9 | |||
Structure | Source_exons | 1 | 154 | |||
204 | 484 | |||||
774 | 1184 | |||||
DB_info | Database | SwissProt | UniProtAcc | G5EG44 | ||
UniProt | UniProtAcc | G5EG44 | ||||
AlphaFold | entry | G5EG44 | ||||
UniProt_GCRP | UniProtAcc | G5EG44 | ||||
NCBI_protein | GI_number | GI:351064126 | ||||
TREEFAM | TREEFAM_ID | TF315654 | ||||
Protein_id | CHROMOSOME_X | CCD72421 | 1 | |||
DB_remark | MDL-1 protein; contains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00003163 | ||||
Corresponding_transcript | R03E9.1.1 | |||||
Corresponding_protein | CE04784 | |||||
Corresponding_PCR_product | cenix:66-c8 | |||||
mv_R03E9.1 | ||||||
sjj2_R03E9.1.1 | ||||||
sjj_R03E9.1 | ||||||
smd_R03E9.1:2 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (35) | ||||||
RNAi_result (15) | ||||||
Microarray_results (17) | ||||||
Brief_identification | Mad-like protein 1 | Accession_evidence | UniProt | SP:G5EG44 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |