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WormBase Tree Display for CDS: PPA38599

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Name Class

PPA38599SMapS_parentSequencePPA_ChrIV
StructureSource_exons1132
178265
313435
490572
716812
8731039
18601985
20842293
DB_infoDatabasepristionchus.orgcdsgene-UMM-S230-0.11
DB_remarkcontains similarity to Pfam domain PF00320 (GATA zinc finger); contains similarity to Interpro domains IPR039355 (Transcription factor GATA), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276968
Corresponding_transcriptPPA38599.1
Corresponding_proteinPP58463
Corresponding_oligo_setGPL14372_Probes_38713
GPL14372_Probes_38715
Microarray_resultsGPL14372_Probes_38713
GPL14372_Probes_38715
RNASeq_FPKMWBls:00000327.84467From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001019.26584From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated