WormBase Tree Display for CDS: PPA15031
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PPA15031 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (30) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S66-29.47 | ||
DB_remark | PPA-UNC-32 protein; contains similarity to Pfam domain PF01496 (V-type ATPase 116kDa subunit family); contains similarity to Interpro domains IPR026028 (ATPase, V0 complex, subunit 116kDa, eukaryotic), IPR002490 (V-type ATPase, V0 complex, 116kDa subunit family) | |||||
Origin (2) | ||||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00104585 | ||||
Corresponding_transcript | PPA15031.1 | |||||
Corresponding_protein | PP59218 | |||||
Corresponding_oligo_set | GPL14372_Probes_46890 | |||||
GPL14372_Probes_46891 | ||||||
GPL14372_Probes_5745 | ||||||
GPL14372_Probes_5746 | ||||||
Microarray_results | GPL14372_Probes_5745 | |||||
GPL14372_Probes_5746 | ||||||
GPL14372_Probes_46890 | ||||||
GPL14372_Probes_46891 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 1.36491 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S66-29.47 | Curator_confirmed | WBPerson4055 | |||
Method | curated |