WormBase Tree Display for CDS: PPA09500
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PPA09500 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (19) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-36.11 | ||
DB_remark | PPA-UNC-34 protein; contains similarity to Pfam domains PF00568 (WH1 domain), PF08776 (VASP tetramerisation domain); contains similarity to Interpro domains IPR011993 (PH-like domain superfamily), IPR038023 (VASP tetramerisation domain superfamily), IPR014885 (VASP tetramerisation), IPR042180 (), IPR000697 (WH1/EVH1 domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00099054 | ||||
Corresponding_transcript | PPA09500.1 | |||||
Corresponding_protein | PP73293 | |||||
Corresponding_oligo_set | GPL14372_Probes_33309 | |||||
Microarray_results | GPL14372_Probes_33309 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-36.11 | Curator_confirmed | WBPerson4055 | |||
Method | curated |