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WormBase Tree Display for CDS: OVOC6342

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Name Class

OVOC6342EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM2_99
StructureSource_exons1131
9161074
13691460
17961946
22872426
26432819
29212982
31833316
40094135
DB_infoDB_remarkOVO-PRX-6 protein; contains similarity to Pfam domains PF00019 (Transforming growth factor beta like domain), PF00688 (TGF-beta propeptide); contains similarity to Interpro domains IPR015615 (Transforming growth factor-beta-related), IPR029034 (Cystine-knot cytokine), IPR001111 (TGF-beta, propeptide), IPR001839 (Transforming growth factor-beta, C-terminal)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00243151
Corresponding_transcriptOVOC6342.1
Corresponding_proteinOVP14556
Matching_cDNAovolvulus_GG1280|c46_g2_i17Inferred_automaticallytranscript_builder.pl
Brief_identificationGrowth/differentiation factor 15 homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001077.30719From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010819.7375From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
21.9946From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
8.30282From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066413.9472From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
20.129From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140424 es9] Gene model OVOC6342 has been split into this and OVOC13459 based on RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated