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WormBase Tree Display for CDS: OVOC565

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Name Class

OVOC565SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons145
595663
873945
10561205
12961423
15111577
20802165
23102413
25132590
28663238
DB_infoDB_remarkOVO-UNC-57 protein; contains similarity to Pfam domains PF00018 (SH3 domain), PF03114 (BAR domain); contains similarity to Interpro domains IPR027267 (AH/BAR domain superfamily), IPR036028 (SH3-like domain superfamily), IPR028501 (), IPR001452 (SH3 domain), IPR004148 (BAR domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237374
Corresponding_transcriptOVOC565.1
OVOC565.2
Corresponding_proteinOVP11703
Matching_cDNAovolvulus_GG629|c212_g3_i11Inferred_automaticallytranscript_builder.pl
ovolvulus_GG629|c212_g3_i13Inferred_automaticallytranscript_builder.pl
ovolvulus_GG629|c212_g3_i14Inferred_automaticallytranscript_builder.pl
Brief_identificationEndophilin-A homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (12)
WBls:00001077.53041From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010814.3198From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
15.4336From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
5.41598From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066436.7656From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated