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WormBase Tree Display for CDS: OVOC4455e

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Name Class

OVOC4455eEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceOVOC_OM2_21
StructureSource_exons164
779889
42554330
46734767
51015215
53825517
DB_infoDB_remarkOVO-UNC-43 protein; contains similarity to Pfam domain PF08332 (Calcium/calmodulin dependent protein kinase II association domain); contains similarity to Interpro domains IPR013543 (Calcium/calmodulin-dependent protein kinase II, association-domain), IPR032710 (NTF2-like domain superfamily)
Origin (2)
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformCurator_confirmedWBPerson4055
Feature_evidenceWBsf933707
VisibleGeneWBGene00241264
Corresponding_transcriptOVOC4455e.1
Corresponding_proteinOVP14659
Brief_identificationCalcium/calmodulin-dependent protein kinase type II homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (12)
WBls:000010723.9535From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010816.6281From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
22.332From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
43.4956From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006647.16173From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
7.58851From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[150217 mh6] Created this isoform based on the RNASeq splice data and the SL1 site.Curator_confirmedWBPerson4055
Feature_evidenceWBsf933707
From_analysisRNASeq
Methodcurated