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WormBase Tree Display for CDS: OVOC4455d

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Name Class

OVOC4455dEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceOVOC_OM2_21
StructureSource_exons1295
9831078
66136688
70317125
74597573
77407875
DB_infoDB_remarkOVO-UNC-43 protein; contains similarity to Pfam domain PF08332 (Calcium/calmodulin dependent protein kinase II association domain); contains similarity to Interpro domains IPR013543 (Calcium/calmodulin-dependent protein kinase II, association-domain), IPR032710 (NTF2-like domain superfamily)
Origin (2)
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformCurator_confirmedWBPerson4055
Feature_evidenceWBsf933706
VisibleGeneWBGene00241264
Corresponding_transcriptOVOC4455d.1
Corresponding_proteinOVP14715
Brief_identificationCalcium/calmodulin-dependent protein kinase type II homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (14)
WBls:00001076.08108From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010810.4247From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
11.4586From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
2.34307From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066418.7566From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
4.03392From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[150217 mh6] Created this isoform based on the RNASeq splice data and the SL1 site.Curator_confirmedWBPerson4055
Feature_evidenceWBsf933706
From_analysisRNASeq
Methodcurated