WormBase Tree Display for CDS: OVOC4455d
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OVOC4455d | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM2_21 | |||
Structure | Source_exons | 1 | 295 | |||
983 | 1078 | |||||
6613 | 6688 | |||||
7031 | 7125 | |||||
7459 | 7573 | |||||
7740 | 7875 | |||||
DB_info | DB_remark | OVO-UNC-43 protein; contains similarity to Pfam domain PF08332 (Calcium/calmodulin dependent protein kinase II association domain); contains similarity to Interpro domains IPR013543 (Calcium/calmodulin-dependent protein kinase II, association-domain), IPR032710 (NTF2-like domain superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Feature_evidence | WBsf933706 | |||||
Visible | Gene | WBGene00241264 | ||||
Corresponding_transcript | OVOC4455d.1 | |||||
Corresponding_protein | OVP14715 | |||||
Brief_identification | Calcium/calmodulin-dependent protein kinase type II homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (14) | |||||
WBls:0000107 | 6.08108 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 10.4247 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
11.4586 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
2.34307 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 18.7566 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
4.03392 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Remark | [150217 mh6] Created this isoform based on the RNASeq splice data and the SL1 site. | Curator_confirmed | WBPerson4055 | |||
Feature_evidence | WBsf933706 | |||||
From_analysis | RNASeq | |||||
Method | curated |