WormBase Tree Display for CDS: OVOC4243
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OVOC4243 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM2_15 | |||
Structure | Source_exons | 1 | 319 | |||
2605 | 2750 | |||||
5452 | 5690 | |||||
5787 | 5935 | |||||
6095 | 6264 | |||||
6469 | 6589 | |||||
6824 | 7012 | |||||
8447 | 8613 | |||||
8708 | 8923 | |||||
DB_info | DB_remark | OVO-UNC-58 protein; contains similarity to Pfam domain PF07885 (Ion channel); contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Potassium channel domain) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00241052 | ||||
Corresponding_transcript | OVOC4243.1 | |||||
Corresponding_protein | OVP14372 | |||||
Matching_cDNA | ovolvulus_GG1367|c131_g1_i7 | Inferred_automatically | transcript_builder.pl | |||
Brief_identification | Uncoordinated protein 58 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 3.52264 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 1.39266 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
4.22025 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
5.58963 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 1.63929 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
3.50418 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Remark | [140423 es9] Merged OVOC4243 and OVOC4244 based on RNA-Seq and protein evidence data. | Curator_confirmed | WBPerson2062 | |||
Method | curated |