Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: OVOC1610

expand all nodes | collapse all nodes | view schema

Name Class

OVOC1610EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_63
StructureSource_exons (14)
DB_infoDB_remarkOVO-SMP-1 protein; contains similarity to Pfam domain PF01403 (Sema domain); contains similarity to Interpro domains IPR027231 (Semaphorin), IPR016201 (PSI domain), IPR001627 (Sema domain), IPR036352 (Sema domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00238419
Corresponding_transcriptOVOC1610.1
Corresponding_proteinOVP13453
Matching_cDNAovolvulus_GG634|c17_g1_i6Inferred_automaticallytranscript_builder.pl
Brief_identificationSemaphorin-1A homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (14)
WBls:00001073.72888From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.3666From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
16.6997From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
1.70277From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006642.36792From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
3.39755From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[140320 es9] Merged OVOC1609 and OVOC1610 based on RNA-Seq, SL1 and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated