WormBase Tree Display for CDS: F49B2.2
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| F49B2.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F49B2 | |||
| Structure | Source_exons | 1 | 74 | |||
| 122 | 977 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O45536 | ||
| UniProt | UniProtAcc | O45536 | ||||
| AlphaFold | entry | O45536 | ||||
| UniProt_GCRP | UniProtAcc | O45536 | ||||
| NCBI_protein | GI_number | GI:3877320 | ||||
| Protein_id | CHROMOSOME_I | CAB04424 | 1 | |||
| DB_remark | FBXB-67 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF07735 (F-box associated); contains similarity to Interpro domains IPR012885 (F-box associated domain, type 2), IPR001810 (F-box domain), IPR053222 (Zygotic Embryogenesis-Associated Protein) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00009862 | ||||
| Corresponding_transcript | F49B2.2.1 | |||||
| Corresponding_protein | CE16073 | |||||
| Corresponding_PCR_product | cenix:95-g10 | |||||
| mv_F49B2.2 | ||||||
| sjj_F49B2.2 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_25134 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_33751 | ||||||
| YA_Nanopore_Li_221748 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF063A4_1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6093|c3_g2_i1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6093|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_227675 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6093|c3_g3_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00047790 | |||||
| WBRNAi00003720 | ||||||
| WBRNAi00032508 | ||||||
| WBRNAi00061816 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:O45536 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf123437 | |||||
| Method | curated |
