WormBase Tree Display for CDS: F38A3.2
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F38A3.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F38A3 | |||
Structure | Source_exons | 1 | 83 | |||
296 | 1133 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q20136 | ||
UniProt | UniProtAcc | Q20136 | ||||
AlphaFold | entry | Q20136 | ||||
UniProt_GCRP | UniProtAcc | Q20136 | ||||
NCBI_protein | GI_number | GI:3876828 | ||||
Protein_id | CHROMOSOME_II | CAA90188 | 1 | |||
DB_remark | RAM-2 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat), IPR050632 (Nematode Cuticular Collagen) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004300 | ||||
Corresponding_transcript | F38A3.2.1 | |||||
Corresponding_protein | CE02214 | |||||
Corresponding_PCR_product | cenix:184-c6 | |||||
mv_F38A3.2 | ||||||
sjj_F38A3.2 | ||||||
Corresponding_oligo_set (22) | ||||||
Matching_cDNA (289) | ||||||
RNAi_result | WBRNAi00014522 | |||||
WBRNAi00007391 | ||||||
WBRNAi00031938 | ||||||
WBRNAi00046667 | ||||||
Microarray_results (23) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q20136 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |