WormBase Tree Display for CDS: F25B5.5
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F25B5.5 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F25B5 | ||
Structure | Source_exons | 1 | 466 | ||
746 | 811 | ||||
863 | 1007 | ||||
1058 | 1418 | ||||
1463 | 1616 | ||||
1662 | 1792 | ||||
1836 | 1985 | ||||
2035 | 2205 | ||||
DB_info | Database | SwissProt | UniProtAcc | Q09316 | |
UniProt | UniProtAcc | Q09316 | |||
AlphaFold | entry | Q09316 | |||
UniProt_GCRP | UniProtAcc | Q09316 | |||
NCBI_protein | GI_number | GI:373219554 | |||
TREEFAM | TREEFAM_ID | TF101033 | |||
Protein_id | CHROMOSOME_III | CCD68781 | 1 | ||
DB_remark | contains similarity to Pfam domains PF00919 (Uncharacterized protein family UPF0004), PF01938 (TRAM domain), PF04055 (Radical SAM superfamily); contains similarity to Interpro domains IPR007197 (Radical SAM), IPR038135 (Methylthiotransferase, N-terminal domain superfamily), IPR023404 (Radical SAM, alpha/beta horseshoe), IPR002792 (TRAM domain), IPR005839 (Methylthiotransferase), IPR013848 (Methylthiotransferase, N-terminal), IPR006638 (Elp3/MiaA/NifB-like, radical SAM core domain) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible (11) | |||||
Associated_feature | WBsf000999 | ||||
Method | curated |