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WormBase Tree Display for CDS: F17C11.3

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Name Class

F17C11.3EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF17C11
StructureSource_exons1150
193549
5951017
16011684
DB_infoDatabaseTrEMBLUniProtAccQ19514
UniProtUniProtAccQ19514
AlphaFoldentryQ19514
UniProt_GCRPUniProtAccQ19514
NCBI_proteinGI_numberGI:3876055
TREEFAMTREEFAM_IDTF319192
Protein_idCHROMOSOME_VCAA966251
DB_remarkCOL-153 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000726
Corresponding_transcriptF17C11.3.1
Corresponding_proteinCE05650
Corresponding_PCR_productcenix:85-h4
mv_F17C11.3
sjj_F17C11.3
Corresponding_oligo_set (17)
Matching_cDNA (39)
RNAi_resultWBRNAi00044875
WBRNAi00013458
Microarray_results (18)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q19514
RNASeq_FPKM (74)
Methodcurated