WormBase Tree Display for CDS: F13A7.7
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| F13A7.7 | SMap | S_parent | Sequence | F13A7 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 138 | |||
| 192 | 305 | |||||
| 355 | 449 | |||||
| 496 | 568 | |||||
| 903 | 1325 | |||||
| 1376 | 1609 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XTW0 | ||
| UniProt | UniProtAcc | Q9XTW0 | ||||
| AlphaFold | entry | Q9XTW0 | ||||
| UniProt_GCRP | UniProtAcc | Q9XTW0 | ||||
| NCBI_protein | GI_number | GI:3875815 | ||||
| TREEFAM | TREEFAM_ID | TF353434 | ||||
| Protein_id | CHROMOSOME_V | CAB07580 | 1 | |||
| DB_remark | contains similarity to Interpro domain IPR038765 (Papain-like cysteine peptidase superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00008725 | ||||
| Corresponding_transcript | F13A7.7.1 | |||||
| Corresponding_protein | CE19789 | |||||
| Corresponding_PCR_product | cenix:160-a5 | |||||
| mv_F13A7.7 | ||||||
| sjj_F13A7.7 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | male_Nanopore_Roach_52092 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_150018 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_150731 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_163968 | ||||||
| male_Nanopore_Roach_42139 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_345307 | Inferred_automatically | transcript_builder.pl | ||||
| FM251279 | Inferred_automatically | transcript_builder.pl | ||||
| FM251278 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG1009|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00044469 | |||||
| WBRNAi00013185 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Ubiquitin-like protease family profile domain-containing protein | Accession_evidence | UniProt | TR:Q9XTW0 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
