WormBase Tree Display for CDS: F10B5.2
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F10B5.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F10B5 | |||
Structure | Source_exons | 1 | 202 | |||
249 | 340 | |||||
386 | 730 | |||||
1864 | 2094 | |||||
2147 | 2350 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q09305 | ||
UniProt | UniProtAcc | Q09305 | ||||
AlphaFold | entry | Q09305 | ||||
UniProt_GCRP | UniProtAcc | Q09305 | ||||
NCBI_protein | GI_number | GI:3875710 | ||||
TREEFAM | TREEFAM_ID | TF315089 | ||||
Protein_id | CHROMOSOME_II | CAA88309 | 1 | |||
DB_remark | contains similarity to Pfam domains PF05282 (AAR2 C-terminal repeat region), PF20981 (AAR2 N-terminal domain); contains similarity to Interpro domains IPR007946 (A1 cistron-splicing factor, AAR2), IPR033647 (AAR2, N-terminal), IPR038514 (AAR2, C-terminal domain superfamily), IPR033648 (AAR2, C-terminal domain), IPR038516 (AAR2, N-terminal domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008639 | ||||
Corresponding_transcript | F10B5.2.1 | |||||
Corresponding_protein | CE01544 | |||||
Corresponding_PCR_product | cenix:160-f3 | |||||
mv_F10B5.2 | ||||||
sjj2_F10B5.2 | ||||||
sjj_F10B5.2 | ||||||
Corresponding_oligo_set (20) | ||||||
Matching_cDNA (38) | ||||||
RNAi_result | WBRNAi00030743 | |||||
WBRNAi00044208 | ||||||
WBRNAi00061548 | ||||||
Microarray_results (20) | ||||||
Brief_identification | Protein AAR2 homolog | Accession_evidence | UniProt | SP:Q09305 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf125399 | |||||
Method | curated |