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WormBase Tree Display for CDS: F10B5.2

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Name Class

F10B5.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF10B5
StructureSource_exons1202
249340
386730
18642094
21472350
DB_infoDatabaseSwissProtUniProtAccQ09305
UniProtUniProtAccQ09305
AlphaFoldentryQ09305
UniProt_GCRPUniProtAccQ09305
NCBI_proteinGI_numberGI:3875710
TREEFAMTREEFAM_IDTF315089
Protein_idCHROMOSOME_IICAA883091
DB_remarkcontains similarity to Pfam domains PF05282 (AAR2 C-terminal repeat region), PF20981 (AAR2 N-terminal domain); contains similarity to Interpro domains IPR007946 (A1 cistron-splicing factor, AAR2), IPR033647 (AAR2, N-terminal), IPR038514 (AAR2, C-terminal domain superfamily), IPR033648 (AAR2, C-terminal domain), IPR038516 (AAR2, N-terminal domain superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00008639
Corresponding_transcriptF10B5.2.1
Corresponding_proteinCE01544
Corresponding_PCR_productcenix:160-f3
mv_F10B5.2
sjj2_F10B5.2
sjj_F10B5.2
Corresponding_oligo_set (20)
Matching_cDNA (38)
RNAi_resultWBRNAi00030743
WBRNAi00044208
WBRNAi00061548
Microarray_results (20)
Brief_identificationProtein AAR2 homologAccession_evidenceUniProtSP:Q09305
RNASeq_FPKM (74)
Associated_featureWBsf125399
Methodcurated