WormBase Tree Display for CDS: D1007.7
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D1007.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | D1007 | |||
Structure | Source_exons | 1 | 162 | |||
232 | 490 | |||||
537 | 1056 | |||||
1126 | 1748 | |||||
2015 | 2553 | |||||
2615 | 2749 | |||||
3069 | 3520 | |||||
4011 | 4105 | |||||
4161 | 4342 | |||||
DB_info | Database (6) | |||||
Protein_id | CHROMOSOME_I | CCD67318 | 1 | |||
DB_remark | NRD-1 protein; contains similarity to Pfam domains PF00076 (RNA recognition motif), PF04818 (CID domain); contains similarity to Interpro domains IPR035979 (RNA-binding domain superfamily), IPR006569 (CID domain), IPR051485 (SR-related and CTD-associated factor), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR008942 (ENTH/VHS), IPR000504 (RNA recognition motif domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00017004 | ||||
Corresponding_transcript | D1007.7.1 | |||||
Corresponding_protein | CE26916 | |||||
Corresponding_PCR_product | cenix:71-g5 | |||||
mv_D1007.7 | ||||||
sjj_D1007.7 | ||||||
Corresponding_oligo_set (13) | ||||||
Matching_cDNA (65) | ||||||
RNAi_result | WBRNAi00000829 | |||||
WBRNAi00116573 | ||||||
WBRNAi00003263 | ||||||
WBRNAi00091008 | ||||||
WBRNAi00030312 | ||||||
WBRNAi00081952 | ||||||
WBRNAi00081946 | ||||||
WBRNAi00043332 | ||||||
Microarray_results (15) | ||||||
Brief_identification | CID domain-containing protein | Accession_evidence | UniProt | TR:O01864 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf014940 | |||||
Method | curated |