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WormBase Tree Display for CDS: CRE15417

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Name Class

CRE15417SMapS_parentSequenceCrem_Contig27
StructureSource_exons1124
209320
362584
629763
8101092
11431240
12941388
18132026
DB_infoDatabaseTREEFAMTREEFAM_IDTF317192
DB_remarkcontains similarity to Pfam domains PF07970 (Endoplasmic reticulum vesicle transporter), PF13850 (Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)); contains similarity to Interpro domains IPR039542 (Endoplasmic reticulum vesicle transporter, N-terminal), IPR012936 (Endoplasmic reticulum vesicle transporter, C-terminal)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00058594
Corresponding_transcriptCRE15417.1
Corresponding_proteinRP07334
Corresponding_oligo_setGPL14146_CRE15417_905-964_0.943_6_B
GPL14146_CRE15417_1004-1063_0.931_9_C
GPL14146_CRE15417_1110-1169_0.962_1_A
Matching_cDNADT935962Inferred_automaticallytranscript_builder.pl
DY528681Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE15417_1004-1063_0.931_9_C
GPL14146_CRE15417_1110-1169_0.962_1_A
GPL14146_CRE15417_905-964_0.943_6_B
RNASeq_FPKM (6)
Methodcurated