WormBase Tree Display for CDS: CRE15417
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CRE15417 | SMap | S_parent | Sequence | Crem_Contig27 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 124 | ||
209 | 320 | ||||
362 | 584 | ||||
629 | 763 | ||||
810 | 1092 | ||||
1143 | 1240 | ||||
1294 | 1388 | ||||
1813 | 2026 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF317192 | |
DB_remark | contains similarity to Pfam domains PF07970 (Endoplasmic reticulum vesicle transporter), PF13850 (Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)); contains similarity to Interpro domains IPR039542 (Endoplasmic reticulum vesicle transporter, N-terminal), IPR012936 (Endoplasmic reticulum vesicle transporter, C-terminal) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis remanei | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00058594 | |||
Corresponding_transcript | CRE15417.1 | ||||
Corresponding_protein | RP07334 | ||||
Corresponding_oligo_set | GPL14146_CRE15417_905-964_0.943_6_B | ||||
GPL14146_CRE15417_1004-1063_0.931_9_C | |||||
GPL14146_CRE15417_1110-1169_0.962_1_A | |||||
Matching_cDNA | DT935962 | Inferred_automatically | transcript_builder.pl | ||
DY528681 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14146_CRE15417_1004-1063_0.931_9_C | ||||
GPL14146_CRE15417_1110-1169_0.962_1_A | |||||
GPL14146_CRE15417_905-964_0.943_6_B | |||||
RNASeq_FPKM (6) | |||||
Method | curated |