WormBase Tree Display for CDS: CRE15333

CRE15333 SMap: S_parent: Sequence: Crem_Contig27
  Structure: Source_exons: 1 135
      186 275
      322 477
      518 868
      927 1009
      1057 1764
      1814 2402
      2441 2716
      2764 2975
      3022 3175
  DB_info: Database: TREEFAM TREEFAM_ID TF314500
    DB_remark: CRE-RBG-1 protein; contains similarity to Pfam domain PF13890 (Rab3 GTPase-activating protein catalytic subunit); contains similarity to Interpro domain IPR026147 (Rab3GAP catalytic subunit, conserved domain)
  Origin: From_laboratory: RW
    Species: Caenorhabditis remanei
  Properties: Coding: CDS
      Prediction_status: Predicted
  Visible: Gene: WBGene00058590
    Corresponding_transcript: CRE15333.1
    Corresponding_protein: RP45116
    Corresponding_oligo_set: GPL14146_CRE15333_1881-1940_0.874_40_B
      GPL14146_CRE15333_1991-2050_0.915_21_A
      GPL14146_CRE15333_2638-2697_0.965_1_C
    Microarray_results: GPL14146_CRE15333_1881-1940_0.874_40_B
      GPL14146_CRE15333_1991-2050_0.915_21_A
      GPL14146_CRE15333_2638-2697_0.965_1_C
    RNASeq_FPKM: WBls:0000004 22.9493 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        24.3813 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (54)
      WBls:0000027 11.4805 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.8758 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        6.53488 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        6.55259 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 1.00906 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        4.9834 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        5.39392 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 4.70477 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.98838 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.11267 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        6.53943 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        7.10199 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        7.772 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 2.89937 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        3.4442 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        3.55726 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        3.83928 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        4.44904 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        5.03222 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        5.1975 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        5.43092 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        5.56056 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        7.13246 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
  Method: curated