WormBase Tree Display for CDS: CRE13457
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CRE13457 | SMap | S_parent | Sequence | Crem_Contig61 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 36 | ||
82 | 369 | ||||
412 | 680 | ||||
730 | 1179 | ||||
1227 | 1331 | ||||
1377 | 1854 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF106173 | |
DB_remark | CRE-HDA-6 protein; contains similarity to Pfam domain PF00850 (Histone deacetylase domain); contains similarity to Interpro domains IPR023696 (Ureohydrolase domain superfamily), IPR023801 (Histone deacetylase domain), IPR000286 (Histone deacetylase family), IPR037138 (Histone deacetylase domain superfamily) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis remanei | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00064007 | |||
Corresponding_transcript | CRE13457.1 | ||||
Corresponding_protein | RP45637 | ||||
Corresponding_oligo_set | GPL14146_CRE13457_537-596_0.747_133_C | ||||
GPL14146_CRE13457_760-819_0.888_26_B | |||||
GPL14146_CRE13457_920-979_0.924_5_A | |||||
Matching_cDNA | DR778985 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results | GPL14146_CRE13457_537-596_0.747_133_C | ||||
GPL14146_CRE13457_760-819_0.888_26_B | |||||
GPL14146_CRE13457_920-979_0.924_5_A | |||||
RNASeq_FPKM (6) | |||||
Method | curated |