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WormBase Tree Display for CDS: CJA21226

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Name Class

CJA21226SMapS_parentSequenceCjap.Contig15924
StructureSource_exons1825
DB_infoDB_remarkCJP-UNC-11.1 protein; contains similarity to Pfam domain PF07651 (ANTH domain); contains similarity to Interpro domains IPR011417 (AP180 N-terminal homology (ANTH) domain), IPR014712 (ANTH domain superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Start_not_found1
VisibleGeneWBGene00176798
Corresponding_transcriptCJA21226.1
Corresponding_proteinJA46095
Corresponding_oligo_setGPL14145_CJA21226_460-519_0.634_120_C
GPL14145_CJA21226_882-941_0.939_1_B
GPL14145_CJA21226_909-968_0.868_18_A
Microarray_resultsGPL14145_CJA21226_460-519_0.634_120_C
GPL14145_CJA21226_882-941_0.939_1_B
GPL14145_CJA21226_909-968_0.868_18_A
RNASeq_FPKMWBls:000000459.8318From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002776.2992From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003840.7548From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
44.7674From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004122.16From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
22.4877From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
22.7477From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
39.5256From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
47.9518From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
51.3296From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
62.9432From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
63.2503From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig15924.g10713.t1[100726 mh6]
Methodcurated