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WormBase Tree Display for CDS: CJA13143

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Name Class

CJA13143SMapS_parentSequenceCjap.Contig18218
StructureSource_exons (11)
DB_infoDatabaseTREEFAMTREEFAM_IDTF315229
DB_remarkCJP-UNC-43 protein; contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00132347
Corresponding_transcriptCJA13143.1
Corresponding_proteinJA42432
Corresponding_oligo_setGPL14145_CJA13143_715-774_0.873_24_C
GPL14145_CJA13143_823-882_0.940_1_B
GPL14145_CJA13143_1024-1083_0.749_98_A
Microarray_resultsGPL14145_CJA13143_1024-1083_0.749_98_A
GPL14145_CJA13143_715-774_0.873_24_C
GPL14145_CJA13143_823-882_0.940_1_B
RNASeq_FPKMWBls:000000493.6802From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002763.3258From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003856.869From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
58.3452From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004112.5497From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
13.4944From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
13.8059From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
15.9158From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
17.5431From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
17.7239From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
17.8357From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
26.0191From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig18218.g29065.t1[100726 mh6]
Methodcurated