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WormBase Tree Display for CDS: CJA09638

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Name Class

CJA09638SMapS_parentSequenceCjap.Contig18059
StructureSource_exons1187
238453
496779
8251076
17141992
20592107
21702219
DB_infoDB_remarkCJP-INX-14 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00128842
Corresponding_transcriptCJA09638.1
Corresponding_proteinJA54542
Corresponding_oligo_set (3)
Matching_cDNAFD512912Inferred_automaticallytranscript_builder.pl
FF122514Inferred_automaticallytranscript_builder.pl
japonica_GG7122|c0_g1_i1Inferred_automaticallytranscript_builder.pl
japonica_GG11350|c0_g1_i1Inferred_automaticallytranscript_builder.pl
japonica_GG11353|c0_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA09638_1128-1187_0.888_19_A
GPL14145_CJA09638_1224-1283_0.900_14_B
GPL14145_CJA09638_646-705_0.887_20_C
RNASeq_FPKMWBls:00000042.51743From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.852914From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.2884From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
1.7742From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004112.0891From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
13.714From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
14.5399From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
14.6914From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
50.1864From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
5.75971From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
58.754From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
59.1796From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
Remarkbased on Augustus prediction Cjap.Contig18059.g23973.t1[100726 mh6]
Methodcurated