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WormBase Tree Display for CDS: CJA04249

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Name Class

CJA04249SMapS_parentSequenceCjap.Contig18184
StructureSource_exons (4)
DB_infoDB_remarkCJP-INX-2 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00123453
Corresponding_transcriptCJA04249.1
Corresponding_proteinJA45487
Corresponding_oligo_setGPL14145_CJA04249_806-865_0.901_4_B
GPL14145_CJA04249_873-932_0.923_2_C
GPL14145_CJA04249_1239-1298_0.959_1_A
Microarray_resultsGPL14145_CJA04249_1239-1298_0.959_1_A
GPL14145_CJA04249_806-865_0.901_4_B
GPL14145_CJA04249_873-932_0.923_2_C
RNASeq_FPKMWBls:0000004318.861From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000272.87066From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.05099From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
1.60744From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.781736From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
112.593From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
118.115From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
27.4831From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.55235From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3.69425From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
6.68129From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
89.4508From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig18184.g27226.t1[100726 mh6]
Methodcurated