WormBase Tree Display for CDS: CD4.6
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CD4.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CD4 | |||
Structure | Source_exons | 1 | 150 | |||
197 | 389 | |||||
439 | 509 | |||||
559 | 688 | |||||
739 | 977 | |||||
DB_info | Database | SwissProt | UniProtAcc | O44156 | ||
UniProt | UniProtAcc | O44156 | ||||
AlphaFold | entry | O44156 | ||||
UniProt_GCRP | UniProtAcc | O44156 | ||||
NCBI_protein | GI_number | GI:373219038 | ||||
TREEFAM | TREEFAM_ID | TF106206 | ||||
Protein_id | CHROMOSOME_V | CCD65121 | 1 | |||
DB_remark | PAS-6 protein; contains similarity to Pfam domains PF00227 (Proteasome subunit), PF10584 (Proteasome subunit A N-terminal signature); contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR029055 (Nucleophile aminohydrolases, N-terminal), IPR000426 (Proteasome alpha-subunit, N-terminal domain), IPR050115 (Proteasome subunit alpha) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00003927 | ||||
Corresponding_transcript | CD4.6.1 | |||||
Corresponding_protein | CE16954 | |||||
Corresponding_PCR_product | cenix:23-f5 | |||||
mv_G_YK4021 | ||||||
sjj_CD4.6 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (136) | ||||||
RNAi_result (23) | ||||||
Microarray_results (16) | ||||||
Brief_identification | Proteasome subunit alpha type-1 | Accession_evidence | UniProt | SP:O44156 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf019523 | |||||
Method | curated |