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WormBase Tree Display for CDS: CD4.6

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Name Class

CD4.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCD4
StructureSource_exons1150
197389
439509
559688
739977
DB_infoDatabaseSwissProtUniProtAccO44156
UniProtUniProtAccO44156
AlphaFoldentryO44156
UniProt_GCRPUniProtAccO44156
NCBI_proteinGI_numberGI:373219038
TREEFAMTREEFAM_IDTF106206
Protein_idCHROMOSOME_VCCD651211
DB_remarkPAS-6 protein; contains similarity to Pfam domains PF00227 (Proteasome subunit), PF10584 (Proteasome subunit A N-terminal signature); contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR029055 (Nucleophile aminohydrolases, N-terminal), IPR000426 (Proteasome alpha-subunit, N-terminal domain), IPR050115 (Proteasome subunit alpha)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00003927
Corresponding_transcriptCD4.6.1
Corresponding_proteinCE16954
Corresponding_PCR_productcenix:23-f5
mv_G_YK4021
sjj_CD4.6
Corresponding_oligo_set (15)
Matching_cDNA (136)
RNAi_result (23)
Microarray_results (16)
Brief_identificationProteasome subunit alpha type-1Accession_evidenceUniProtSP:O44156
RNASeq_FPKM (74)
Associated_featureWBsf019523
Methodcurated