WormBase Tree Display for CDS: CBN20070
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CBN20070 | SMap | S_parent | Sequence | Cbre_Contig12 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 156 | ||
209 | 331 | ||||
373 | 1046 | ||||
1094 | 1225 | ||||
1274 | 1619 | ||||
1664 | 2380 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF314854 | |
DB_remark | contains similarity to Pfam domains PF00035 (Double-stranded RNA binding motif), PF00498 (FHA domain); contains similarity to Interpro domains IPR008984 (SMAD/FHA domain superfamily), IPR014720 (Double-stranded RNA-binding domain), IPR000253 (Forkhead-associated (FHA) domain) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis brenneri | ||||
Properties | Coding | CDS | |||
Prediction_status | Predicted | ||||
Visible | Gene | WBGene00158795 | |||
Corresponding_transcript | CBN20070.1 | ||||
Corresponding_protein | CN04341 | ||||
Corresponding_oligo_set | GPL14142_CBN20070_1034-1093_0.706_179_A | ||||
GPL14142_CBN20070_2028-2087_0.973_1_B | |||||
GPL14142_CBN20070_737-796_0.854_58_C | |||||
Microarray_results | GPL14142_CBN20070_737-796_0.854_58_C | ||||
GPL14142_CBN20070_1034-1093_0.706_179_A | |||||
GPL14142_CBN20070_2028-2087_0.973_1_B | |||||
RNASeq_FPKM (5) | |||||
Remark | Contig33.brenneri.jigsaw.70.mRNA70 | ||||
Method | curated |