WormBase Tree Display for CDS: CBN00533
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CBN00533 | SMap | S_parent | Sequence | Cbre_Contig12 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 45 | ||
99 | 171 | ||||
220 | 485 | ||||
530 | 631 | ||||
676 | 1189 | ||||
1280 | 1459 | ||||
1504 | 1650 | ||||
1699 | 2050 | ||||
2098 | 2485 | ||||
2812 | 3090 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF331806 | |
DB_remark | CBN-PTR-9 protein; contains similarity to Pfam domain PF02460 (Patched family); contains similarity to Interpro domain IPR003392 (Protein patched/dispatched) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis brenneri | ||||
Properties | Coding | CDS | |||
Prediction_status | Predicted | ||||
Visible | Gene | WBGene00139258 | |||
Corresponding_transcript | CBN00533.1 | ||||
Corresponding_protein | CN20698 | ||||
Corresponding_oligo_set | GPL14142_CBN00533_1087-1146_0.861_53_A | ||||
GPL14142_CBN00533_2160-2219_0.789_157_B | |||||
GPL14142_CBN00533_920-979_0.838_95_C | |||||
Microarray_results | GPL14142_CBN00533_920-979_0.838_95_C | ||||
GPL14142_CBN00533_1087-1146_0.861_53_A | |||||
GPL14142_CBN00533_2160-2219_0.789_157_B | |||||
RNASeq_FPKM (5) | |||||
Remark | Missing+from+liftover:+CDS.2 | ||||
Method | curated |