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WormBase Tree Display for CDS: CBG23507

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Name Class

CBG23507SMapS_parentSequencecb25.fpc4470
StructureSource_exons1198
259341
386769
10721189
12391333
16881982
20312141
21892302
DB_infoDatabaseUniProtUniProtAccA8Y3R6
UniProtIdA8Y3R6_CAEBR
TrEMBLUniProtAccA8Y3R6
UniProt_GCRPUniProtAccA8Y3R6
Protein_idcb25.fpc4470CAP395351
DB_remarkCBR-INX-11 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domains IPR031123 (), IPR000990 (Innexin)
OriginFrom_laboratoryCB
SpeciesCaenorhabditis briggsae
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00041852
Corresponding_transcriptCBG23507.1
Corresponding_proteinCBP05492
Corresponding_oligo_setGPL8303_CB6_WBGene00041852_A
GPL8303_CB6_WBGene00041852_B
GPL8303_CB6_WBGene00041852_C
GPL14143_CBG23507_611-670_0.899_17_C
GPL14143_CBG23507_702-761_0.903_13_A
GPL14143_CBG23507_797-856_0.740_95_B
Matching_cDNAbriggsae_GG1843|c7_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL8303_CB6_WBGene00041852_A
GPL8303_CB6_WBGene00041852_B
GPL8303_CB6_WBGene00041852_C
GPL14143_CBG23507_611-670_0.899_17_C
GPL14143_CBG23507_702-761_0.903_13_A
GPL14143_CBG23507_797-856_0.740_95_B
RNASeq_FPKM (9)
Last_reviewed31 Aug 2016 10:21:23WBPerson4025
Remark[gffnote] orthologous to W04D2.3 by best mutual match (eval=0) ; Ortholog W04D2.3 ; Supported_by_ortholog ; Supported_by_paralogs ; Supported_by_multiple_predictions ; Brigpep BP:CBP05492 ; Gene WBGene00041852
[20080722 tb] Modified based on Jigsaw gene ContigchrV.briggsae.jigsaw.1515
[160826 gw3] The structure of this CDS has been confirmed by the Trinity model 'briggsae_GG1843|c7_g2_i1-chrV-1b.extended'.Curator_confirmedWBPerson4025
Methodcurated