WormBase Tree Display for CDS: C52E4.3
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C52E4.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C52E4 | |||
Structure | Source_exons | 1 | 8 | |||
59 | 232 | |||||
836 | 1010 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q18786 | ||
UniProt | UniProtAcc | Q18786 | ||||
AlphaFold | entry | Q18786 | ||||
UniProt_GCRP | UniProtAcc | Q18786 | ||||
NCBI_protein | GI_number | GI:3875190 | ||||
TREEFAM | TREEFAM_ID | TF319595 | ||||
Protein_id | CHROMOSOME_V | CAB01413 | 1 | |||
DB_remark | SNR-4 protein; contains similarity to Pfam domain PF01423 (LSM domain); contains similarity to Interpro domains IPR027248 (Small nuclear ribonucleoprotein Sm D2), IPR001163 (Sm domain, eukaryotic/archaea-type), IPR010920 (LSM domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004917 | ||||
Corresponding_transcript | C52E4.3.1 | |||||
Corresponding_protein | CE08945 | |||||
Corresponding_PCR_product | WBPaper00038381:C52E4_1_1 | |||||
cenix:182-d10 | ||||||
mv_C52E4.3 | ||||||
sjj_C52E4.3 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (55) | ||||||
RNAi_result (22) | ||||||
Microarray_results (18) | ||||||
Brief_identification | Probable small nuclear ribonucleoprotein Sm D2 | Accession_evidence | UniProt | SP:Q18786 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf016252 | |||||
Method | curated |