WormBase Tree Display for CDS: C48B6.4
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C48B6.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C48B6 | |||
Structure | Source_exons | 1 | 661 | |||
708 | 799 | |||||
843 | 1081 | |||||
1132 | 1258 | |||||
1305 | 1450 | |||||
1496 | 1806 | |||||
1851 | 2113 | |||||
2160 | 2192 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O01508 | ||
UniProt | UniProtAcc | O01508 | ||||
AlphaFold | entry | O01508 | ||||
UniProt_GCRP | UniProtAcc | O01508 | ||||
NCBI_protein | GI_number | GI:373219372 | ||||
Protein_id | CHROMOSOME_I | CCD67581 | 1 | |||
DB_remark | contains similarity to Pfam domain PF00102 (Protein-tyrosine phosphatase); contains similarity to Interpro domains IPR029021 (Protein-tyrosine phosphatase-like), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain), IPR052782 (Oocyte-to-zygote transition regulator) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00016742 | ||||
Corresponding_transcript | C48B6.4.1 | |||||
Corresponding_protein | CE08806 | |||||
Corresponding_PCR_product | cenix:77-a12 | |||||
mv_C48B6.4 | ||||||
sjj_C48B6.4 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (16) | ||||||
RNAi_result | WBRNAi00029939 | |||||
WBRNAi00042723 | ||||||
WBRNAi00003188 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Tyrosine-protein phosphatase domain-containing protein | Accession_evidence | UniProt | TR:O01508 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |