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WormBase Tree Display for CDS: C41G7.1a

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Name Class

C41G7.1aEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC41G7
StructureSource_exons172
116181
230470
518732
DB_infoDatabaseTrEMBLUniProtAccG5EFQ8
UniProtUniProtAccG5EFQ8
AlphaFoldentryG5EFQ8
NCBI_proteinGI_numberGI:3874905
Protein_idCHROMOSOME_ICAB028381
DB_remarkSMN-1 protein; contains similarity to Pfam domains PF20635 (Survival Motor Neuron, YG-box), PF20636 (Survival Motor Neuron, Gemin2-binding domain); contains similarity to Interpro domains IPR040424 (SMN complex subunit Smn1), IPR049481 (Survival Motor Neuron, Gemin2-binding domain), IPR002999 (Tudor domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformAccession_evidenceNDBAF156887
Inferred_automaticallytranscript_builder
VisibleGeneWBGene00004887
Corresponding_transcriptC41G7.1a.1
C41G7.1a.2
Corresponding_proteinCE08665
Corresponding_PCR_productcenix:230-a7
mv_AAF00192
mv_CAB41945
sjj_C41G7.1
Corresponding_oligo_set (16)
Matching_cDNA (52)
RNAi_result (22)
Microarray_results (19)
Brief_identificationTudor domain-containing proteinAccession_evidenceUniProtTR:G5EFQ8
RNASeq_FPKM (74)
Methodcurated