WormBase Tree Display for CDS: C35D10.2
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| C35D10.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C35D10 | |||
| Structure | Source_exons | 1 | 35 | |||
| 90 | 387 | |||||
| 435 | 1175 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q18488 | ||
| UniProt | UniProtAcc | Q18488 | ||||
| AlphaFold | entry | Q18488 | ||||
| UniProt_GCRP | UniProtAcc | Q18488 | ||||
| NCBI_protein | GI_number | GI:351058950 | ||||
| TREEFAM | TREEFAM_ID | TF313878 | ||||
| Protein_id | CHROMOSOME_III | CCD66775 | 1 | |||
| DB_remark | GIPC-1 protein; contains similarity to Pfam domains PF25082 (GIPC1-3 GH2 domain), PF25083 (GIPC1-3 GH1 domain); contains similarity to Interpro domains IPR055349 (GIPC, GH2), IPR056814 (GIPC1-3, GH1 domain), IPR017379 (PDZ domain-containing protein GIPC1/2/3), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00016440 | ||||
| Corresponding_transcript | C35D10.2.1 | |||||
| Corresponding_protein | CE01196 | |||||
| Corresponding_PCR_product | TH:301B4 | |||||
| cenix:301-b4 | ||||||
| mv_C35D10.2 | ||||||
| sjj_C35D10.2 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (25) | ||||||
| RNAi_result | WBRNAi00011661 | |||||
| WBRNAi00022568 | ||||||
| WBRNAi00005097 | ||||||
| WBRNAi00090599 | ||||||
| WBRNAi00076199 | ||||||
| WBRNAi00041983 | ||||||
| WBRNAi00029578 | ||||||
| WBRNAi00001337 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | PDZ domain-containing protein | Accession_evidence | UniProt | TR:Q18488 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
